WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y40B1B.6 Sequence Name  Y40B1B.6
Length (nt)  2313   Chromosome Location  I: 13438068-13438146
Chromosome . Primary Identifier  I Chromosome Location . Start  13438068
Chromosome Location . End  13438146
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B1B.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20240 SPR-5 86.3 770 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00056320
WBRNAi00004611
WBRNAi00036977
WBRNAi00022756
WBRNAi00089593
WBRNAi00089623
WBRNAi00091519

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y40B1B.6 13438068 13438146 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005010 spr-5 Y40B1B.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y40B1B.6 13438068 13438146 1
CDS:Y40B1B.6 13438907 13439136 1
CDS:Y40B1B.6 13440801 13441106 1
CDS:Y40B1B.6 13442389 13443031 1
CDS:Y40B1B.6 13443843 13444041 1
CDS:Y40B1B.6 13445098 13445274 1
CDS:Y40B1B.6 13446811 13447188 1
CDS:Y40B1B.6 13449630 13449930 1

1 Sequence

Length
2313

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y40B1B.6.1 Y40B1B.6.1 2609   I: 13438058-13450216
Transcript:Y40B1B.6.2 Y40B1B.6.2 2603   I: 13438066-13450218