WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G10A.2b.1 Sequence Name  Y48G10A.2b.1
Length (nt)  738   Chromosome Location  I: 13477401-13484400
Chromosome . Primary Identifier  I Chromosome Location . Start  13477401
Chromosome Location . End  13484400 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G10A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013019 Y48G10A.2 Y48G10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G10A.2b Y48G10A.2b 738   I: 13477401-13477416

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.2b.1 13477401 13484400 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34283   16   I: 13477401-13477416 Caenorhabditis elegans
Exon34285   182   I: 13480032-13480213 Caenorhabditis elegans
Exon34287   206   I: 13482028-13482233 Caenorhabditis elegans
Exon34289   94   I: 13482289-13482382 Caenorhabditis elegans
Exon34291   147   I: 13484107-13484253 Caenorhabditis elegans
Exon34292   93   I: 13484308-13484400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.2b.1 13477401 13484400 -1

1 Sequence

Length
738

1 Sequence Ontology Term

Identifier Name Description
transcript