WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G10A.1.1 Sequence Name  Y48G10A.1.1
Length (nt)  913   Chromosome Location  I: 13489587-13491120
Chromosome . Primary Identifier  I Chromosome Location . Start  13489587
Chromosome Location . End  13491120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013018 Y48G10A.1 Y48G10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G10A.1 Y48G10A.1 843   I: 13489592-13489659

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.1.1 13489587 13491120 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34299   73   I: 13489587-13489659 Caenorhabditis elegans
Exon34300   365   I: 13489718-13490082 Caenorhabditis elegans
Exon34301   475   I: 13490646-13491120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G10A.1.1 13489587 13491120 1

1 Sequence

Length
913

1 Sequence Ontology Term

Identifier Name Description
transcript