WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.18.1 Sequence Name  Y87G2A.18.1
Length (nt)  500   Chromosome Location  I: 13512313-13514290
Chromosome . Primary Identifier  I Chromosome Location . Start  13512313
Chromosome Location . End  13514290 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013604 Y87G2A.18 Y87G2A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.18 Y87G2A.18 357   I: 13512453-13512653

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.18.1 13512313 13514290 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34321   341   I: 13512313-13512653 Caenorhabditis elegans
Exon34325   99   I: 13514076-13514174 Caenorhabditis elegans
Exon34326   60   I: 13514231-13514290 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.18.1 13512313 13514290 -1

1 Sequence

Length
500

1 Sequence Ontology Term

Identifier Name Description
transcript