WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y87G2A.1 Sequence Name  Y87G2A.1
Length (nt)  2343   Chromosome Location  I: 13514550-13514675
Chromosome . Primary Identifier  I Chromosome Location . Start  13514550
Chromosome Location . End  13514675
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40292 Y87G2A.1 89.3 780 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00058599
WBRNAi00026978
WBRNAi00026979
WBRNAi00072789
WBRNAi00075103
WBRNAi00075104
WBRNAi00075109
WBRNAi00026980
WBRNAi00026981
WBRNAi00037899
WBRNAi00075105
WBRNAi00075107
WBRNAi00075106
WBRNAi00075108
WBRNAi00072788
WBRNAi00004839
WBRNAi00004840
WBRNAi00088201
WBRNAi00088324
WBRNAi00075102
WBRNAi00061699
WBRNAi00087033
WBRNAi00087035
WBRNAi00087034
WBRNAi00087163
WBRNAi00087036
WBRNAi00087149
WBRNAi00087037
WBRNAi00103628
WBRNAi00088068

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y87G2A.1 13514550 13514675 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013593 Y87G2A.1 Y87G2A.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y87G2A.1 13514550 13514675 1
CDS:Y87G2A.1 13514751 13515008 1
CDS:Y87G2A.1 13516325 13516777 1
CDS:Y87G2A.1 13518132 13518272 1
CDS:Y87G2A.1 13518867 13519052 1
CDS:Y87G2A.1 13520250 13520625 1
CDS:Y87G2A.1 13521743 13521984 1
CDS:Y87G2A.1 13524420 13524757 1
CDS:Y87G2A.1 13525915 13526137 1

1 Sequence

Length
2343

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y87G2A.1.1 Y87G2A.1.1 2453   I: 13514550-13526247