WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.20.1 Sequence Name  Y87G2A.20.1
Length (nt)  628   Chromosome Location  I: 13528690-13531462
Chromosome . Primary Identifier  I Chromosome Location . Start  13528690
Chromosome Location . End  13531462 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044261 Y87G2A.20 Y87G2A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.20 Y87G2A.20 594   I: 13528706-13528864

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.20.1 13528690 13531462 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34339   175   I: 13528690-13528864 Caenorhabditis elegans
Exon34340   71   I: 13528914-13528984 Caenorhabditis elegans
Exon34341   102   I: 13529065-13529166 Caenorhabditis elegans
Exon34342   104   I: 13530721-13530824 Caenorhabditis elegans
Exon34343   139   I: 13531209-13531347 Caenorhabditis elegans
Exon34344   37   I: 13531426-13531462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.20.1 13528690 13531462 -1

1 Sequence

Length
628

1 Sequence Ontology Term

Identifier Name Description
transcript