WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.7.1 Sequence Name  Y87G2A.7.1
Length (nt)  1765   Chromosome Location  I: 13572379-13575805
Chromosome . Primary Identifier  I Chromosome Location . Start  13572379
Chromosome Location . End  13575805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013596 nyn-2 Y87G2A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.7 Y87G2A.7 1470   I: 13572379-13572970

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.7.1 13572379 13575805 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34397   592   I: 13572379-13572970 Caenorhabditis elegans
Exon34399   203   I: 13573956-13574158 Caenorhabditis elegans
Exon34400   426   I: 13574216-13574641 Caenorhabditis elegans
Exon34401   544   I: 13575262-13575805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.7.1 13572379 13575805 1

1 Sequence

Length
1765

1 Sequence Ontology Term

Identifier Name Description
transcript