WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.8b.1 Sequence Name  Y87G2A.8b.1
Length (nt)  1901   Chromosome Location  I: 13576148-13581430
Chromosome . Primary Identifier  I Chromosome Location . Start  13576148
Chromosome Location . End  13581430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013597 gpi-1 Y87G2A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.8b Y87G2A.8b 1761   I: 13576288-13576390

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.8b.1 13576148 13581430 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34402   243   I: 13576148-13576390 Caenorhabditis elegans
Exon34405   121   I: 13576655-13576775 Caenorhabditis elegans
Exon34409   293   I: 13577608-13577900 Caenorhabditis elegans
Exon34413   851   I: 13578503-13579353 Caenorhabditis elegans
Exon34416   272   I: 13580318-13580589 Caenorhabditis elegans
Exon34418   121   I: 13581310-13581430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.8b.1 13576148 13581430 1

1 Sequence

Length
1901

1 Sequence Ontology Term

Identifier Name Description
transcript