WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y87G2A.10a Sequence Name  Y87G2A.10a
Length (nt)  633   Chromosome Location  I: 13586268-13586540
Chromosome . Primary Identifier  I Chromosome Location . Start  13586268
Chromosome Location . End  13586540
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23139 VPS-28, isoform a 24.2 210 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00067165
WBRNAi00067308
WBRNAi00067372
WBRNAi00067507
WBRNAi00067561
WBRNAi00067866
WBRNAi00067945
WBRNAi00068007
WBRNAi00068146
WBRNAi00004847
WBRNAi00026984
WBRNAi00078461
WBRNAi00090875
WBRNAi00091181
WBRNAi00091180
WBRNAi00076850
WBRNAi00033432
WBRNAi00073407
WBRNAi00073406
WBRNAi00073408
WBRNAi00058600
WBRNAi00077248
WBRNAi00026985
WBRNAi00077245
WBRNAi00116432
WBRNAi00114430
WBRNAi00114429

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y87G2A.10a 13586268 13586540 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013598 vps-28 Y87G2A.10 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y87G2A.10a 13586268 13586540 -1
CDS:Y87G2A.10a 13587655 13587917 -1
CDS:Y87G2A.10a 13588728 13588824 -1

1 Sequence

Length
633

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y87G2A.10a.1 Y87G2A.10a.1 871   I: 13586037-13588831