WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y87G2A.11.1 Sequence Name  Y87G2A.11.1
Length (nt)  1333   Chromosome Location  I: 13589178-13598505
Chromosome . Primary Identifier  I Chromosome Location . Start  13589178
Chromosome Location . End  13598505 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y87G2A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013599 eipr-1 Y87G2A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y87G2A.11 Y87G2A.11 1089   I: 13589421-13589538

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.11.1 13589178 13598505 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34430   361   I: 13589178-13589538 Caenorhabditis elegans
Exon34431   303   I: 13592055-13592357 Caenorhabditis elegans
Exon34432   412   I: 13593349-13593760 Caenorhabditis elegans
Exon34434   133   I: 13598162-13598294 Caenorhabditis elegans
Exon34435   124   I: 13598382-13598505 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y87G2A.11.1 13589178 13598505 -1

1 Sequence

Length
1333

1 Sequence Ontology Term

Identifier Name Description
transcript