WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09C5.2.1 Sequence Name  W09C5.2.1
Length (nt)  1608   Chromosome Location  I: 13629227-13633492
Chromosome . Primary Identifier  I Chromosome Location . Start  13629227
Chromosome Location . End  13633492 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09C5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006793 unc-59 W09C5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09C5.2 W09C5.2 1380   I: 13629233-13629392

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09C5.2.1 13629227 13633492 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34472   166   I: 13629227-13629392 Caenorhabditis elegans
Exon34473   214   I: 13629456-13629669 Caenorhabditis elegans
Exon34477   600   I: 13631483-13632082 Caenorhabditis elegans
Exon34478   79   I: 13632132-13632210 Caenorhabditis elegans
Exon34479   549   I: 13632944-13633492 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09C5.2.1 13629227 13633492 1

1 Sequence

Length
1608

1 Sequence Ontology Term

Identifier Name Description
transcript