WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09C5.5.1 Sequence Name  W09C5.5.1
Length (nt)  2306   Chromosome Location  I: 13640305-13648405
Chromosome . Primary Identifier  I Chromosome Location . Start  13640305
Chromosome Location . End  13648405 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09C5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012352 dkf-1 W09C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09C5.5 W09C5.5 2169   I: 13640434-13640488

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09C5.5.1 13640305 13648405 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34484   184   I: 13640305-13640488 Caenorhabditis elegans
Exon34485   107   I: 13640540-13640646 Caenorhabditis elegans
Exon34486   105   I: 13640696-13640800 Caenorhabditis elegans
Exon34487   352   I: 13641800-13642151 Caenorhabditis elegans
Exon34488   185   I: 13643123-13643307 Caenorhabditis elegans
Exon34490   171   I: 13643619-13643789 Caenorhabditis elegans
Exon34492   389   I: 13644558-13644946 Caenorhabditis elegans
Exon34493   255   I: 13646121-13646375 Caenorhabditis elegans
Exon34494   316   I: 13647185-13647500 Caenorhabditis elegans
Exon34495   138   I: 13647982-13648119 Caenorhabditis elegans
Exon34496   104   I: 13648302-13648405 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09C5.5.1 13640305 13648405 -1

1 Sequence

Length
2306

1 Sequence Ontology Term

Identifier Name Description
transcript