WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09C5.7b.1 Sequence Name  W09C5.7b.1
Length (nt)  1215   Chromosome Location  I: 13656201-13658139
Chromosome . Primary Identifier  I Chromosome Location . Start  13656201
Chromosome Location . End  13658139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09C5.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012353 sac-2 W09C5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09C5.7b W09C5.7b 1215   I: 13656201-13656559

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09C5.7b.1 13656201 13658139 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34505   359   I: 13656201-13656559 Caenorhabditis elegans
Exon34507   565   I: 13657238-13657802 Caenorhabditis elegans
Exon34509   291   I: 13657849-13658139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09C5.7b.1 13656201 13658139 1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
transcript