WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6B3B.1.1 Sequence Name  Y6B3B.1.1
Length (nt)  5977   Chromosome Location  I: 13692685-13702954
Chromosome . Primary Identifier  I Chromosome Location . Start  13692685
Chromosome Location . End  13702954 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3B.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012387 Y6B3B.1 Y6B3B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6B3B.1 Y6B3B.1 5733   I: 13692929-13693095

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.1.1 13692685 13702954 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34577   411   I: 13692685-13693095 Caenorhabditis elegans
Exon34578   85   I: 13693404-13693488 Caenorhabditis elegans
Exon34581   87   I: 13695703-13695789 Caenorhabditis elegans
Exon34582   4011   I: 13695840-13699850 Caenorhabditis elegans
Exon34583   198   I: 13699895-13700092 Caenorhabditis elegans
Exon34584   123   I: 13700147-13700269 Caenorhabditis elegans
Exon34585   78   I: 13700317-13700394 Caenorhabditis elegans
Exon34586   741   I: 13700502-13701242 Caenorhabditis elegans
Exon34588   87   I: 13701888-13701974 Caenorhabditis elegans
Exon34589   84   I: 13702021-13702104 Caenorhabditis elegans
Exon34591   72   I: 13702883-13702954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.1.1 13692685 13702954 -1

1 Sequence

Length
5977

1 Sequence Ontology Term

Identifier Name Description
transcript