WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6B3B.4.1 Sequence Name  Y6B3B.4.1
Length (nt)  3943   Chromosome Location  I: 13756730-13771773
Chromosome . Primary Identifier  I Chromosome Location . Start  13756730
Chromosome Location . End  13771773 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6B3B.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012389 scpr-1 Y6B3B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6B3B.4 Y6B3B.4 3936   I: 13756737-13756804

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.4.1 13756730 13771773 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34645   75   I: 13756730-13756804 Caenorhabditis elegans
Exon34646   106   I: 13756856-13756961 Caenorhabditis elegans
Exon34647   234   I: 13757035-13757268 Caenorhabditis elegans
Exon34648   363   I: 13758119-13758481 Caenorhabditis elegans
Exon34649   147   I: 13758744-13758890 Caenorhabditis elegans
Exon34650   399   I: 13760349-13760747 Caenorhabditis elegans
Exon34652   328   I: 13762134-13762461 Caenorhabditis elegans
Exon34653   194   I: 13763994-13764187 Caenorhabditis elegans
Exon34654   163   I: 13764999-13765161 Caenorhabditis elegans
Exon34655   373   I: 13766569-13766941 Caenorhabditis elegans
Exon34656   1239   I: 13767753-13768991 Caenorhabditis elegans
Exon34657   94   I: 13771117-13771210 Caenorhabditis elegans
Exon34658   228   I: 13771546-13771773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6B3B.4.1 13756730 13771773 1

1 Sequence

Length
3943

1 Sequence Ontology Term

Identifier Name Description
transcript