WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37H9A.3.1 Sequence Name  Y37H9A.3.1
Length (nt)  2434   Chromosome Location  I: 13778895-13792249
Chromosome . Primary Identifier  I Chromosome Location . Start  13778895
Chromosome Location . End  13792249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37H9A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012578 ccct-1 Y37H9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37H9A.3 Y37H9A.3 2346   I: 13778899-13779005

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37H9A.3.1 13778895 13792249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34699   111   I: 13778895-13779005 Caenorhabditis elegans
Exon34712   384   I: 13782064-13782447 Caenorhabditis elegans
Exon34713   200   I: 13783320-13783519 Caenorhabditis elegans
Exon34716   224   I: 13784402-13784625 Caenorhabditis elegans
Exon34717   347   I: 13785000-13785346 Caenorhabditis elegans
Exon34718   148   I: 13785935-13786082 Caenorhabditis elegans
Exon34719   244   I: 13786936-13787179 Caenorhabditis elegans
Exon34720   241   I: 13788984-13789224 Caenorhabditis elegans
Exon34721   226   I: 13790414-13790639 Caenorhabditis elegans
Exon34722   111   I: 13791520-13791630 Caenorhabditis elegans
Exon34723   198   I: 13792052-13792249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37H9A.3.1 13778895 13792249 1

1 Sequence

Length
2434

1 Sequence Ontology Term

Identifier Name Description
transcript