WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09G3.6a.1 Sequence Name  W09G3.6a.1
Length (nt)  3625   Chromosome Location  I: 13814756-13827988
Chromosome . Primary Identifier  I Chromosome Location . Start  13814756
Chromosome Location . End  13827988 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09G3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012369 W09G3.6 W09G3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09G3.6a W09G3.6a 3378   I: 13814996-13815227

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09G3.6a.1 13814756 13827988 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34739   472   I: 13814756-13815227 Caenorhabditis elegans
Exon34741   164   I: 13815295-13815458 Caenorhabditis elegans
Exon34743   845   I: 13817037-13817881 Caenorhabditis elegans
Exon34747   688   I: 13819671-13820358 Caenorhabditis elegans
Exon34750   261   I: 13821326-13821586 Caenorhabditis elegans
Exon34751   388   I: 13822832-13823219 Caenorhabditis elegans
Exon34752   497   I: 13824685-13825181 Caenorhabditis elegans
Exon34753   162   I: 13827304-13827465 Caenorhabditis elegans
Exon34754   88   I: 13827517-13827604 Caenorhabditis elegans
Exon34755   60   I: 13827929-13827988 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09G3.6a.1 13814756 13827988 -1

1 Sequence

Length
3625

1 Sequence Ontology Term

Identifier Name Description
transcript