WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09G3.1a.1 Sequence Name  W09G3.1a.1
Length (nt)  1031   Chromosome Location  I: 13828102-13832146
Chromosome . Primary Identifier  I Chromosome Location . Start  13828102
Chromosome Location . End  13832146 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09G3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012365 W09G3.1 W09G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09G3.1a W09G3.1a 963   I: 13828157-13828378

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09G3.1a.1 13828102 13832146 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34756   277   I: 13828102-13828378 Caenorhabditis elegans
Exon34759   110   I: 13828431-13828540 Caenorhabditis elegans
Exon34762   71   I: 13828735-13828805 Caenorhabditis elegans
Exon34764   212   I: 13829213-13829424 Caenorhabditis elegans
Exon34773   238   I: 13831739-13831976 Caenorhabditis elegans
Exon34776   123   I: 13832024-13832146 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09G3.1a.1 13828102 13832146 -1

1 Sequence

Length
1031

1 Sequence Ontology Term

Identifier Name Description
transcript