WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09G3.1b.2 Sequence Name  W09G3.1b.2
Length (nt)  1656   Chromosome Location  I: 13828244-13832147
Chromosome . Primary Identifier  I Chromosome Location . Start  13828244
Chromosome Location . End  13832147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09G3.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012365 W09G3.1 W09G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09G3.1b W09G3.1b 384   I: 13830155-13830190

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09G3.1b.2 13828244 13832147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34758   135   I: 13828244-13828378 Caenorhabditis elegans
Exon34761   110   I: 13828431-13828540 Caenorhabditis elegans
Exon34763   71   I: 13828735-13828805 Caenorhabditis elegans
Exon34766   978   I: 13829213-13830190 Caenorhabditis elegans
Exon34775   238   I: 13831739-13831976 Caenorhabditis elegans
Exon34778   124   I: 13832024-13832147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09G3.1b.2 13828244 13832147 -1

1 Sequence

Length
1656

1 Sequence Ontology Term

Identifier Name Description
transcript