WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04A8.7a.1 Sequence Name  W04A8.7a.1
Length (nt)  5668   Chromosome Location  I: 13861474-13887640
Chromosome . Primary Identifier  I Chromosome Location . Start  13861474
Chromosome Location . End  13887640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04A8.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006382 taf-1 W04A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04A8.7a W04A8.7a 5235   I: 13861476-13861602

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04A8.7a.1 13861474 13887640 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34837   129   I: 13861474-13861602 Caenorhabditis elegans
Exon34839   196   I: 13861668-13861863 Caenorhabditis elegans
Exon34841   403   I: 13863258-13863660 Caenorhabditis elegans
Exon34843   319   I: 13864655-13864973 Caenorhabditis elegans
Exon34845   629   I: 13866279-13866907 Caenorhabditis elegans
Exon34847   404   I: 13868803-13869206 Caenorhabditis elegans
Exon34849   506   I: 13870501-13871006 Caenorhabditis elegans
Exon34851   309   I: 13872890-13873198 Caenorhabditis elegans
Exon34853   584   I: 13875703-13876286 Caenorhabditis elegans
Exon34855   144   I: 13879063-13879206 Caenorhabditis elegans
Exon34857   192   I: 13879776-13879967 Caenorhabditis elegans
Exon34859   294   I: 13881752-13882045 Caenorhabditis elegans
Exon34861   393   I: 13883342-13883734 Caenorhabditis elegans
Exon34863   592   I: 13885471-13886062 Caenorhabditis elegans
Exon34866   574   I: 13887067-13887640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04A8.7a.1 13861474 13887640 1

1 Sequence

Length
5668

1 Sequence Ontology Term

Identifier Name Description
transcript