WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04A8.7b.1 Sequence Name  W04A8.7b.1
Length (nt)  5563   Chromosome Location  I: 13861476-13887543
Chromosome . Primary Identifier  I Chromosome Location . Start  13861476
Chromosome Location . End  13887543 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04A8.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006382 taf-1 W04A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04A8.7b W04A8.7b 5229   I: 13861476-13861602

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04A8.7b.1 13861476 13887543 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34838   127   I: 13861476-13861602 Caenorhabditis elegans
Exon34840   196   I: 13861668-13861863 Caenorhabditis elegans
Exon34842   403   I: 13863258-13863660 Caenorhabditis elegans
Exon34844   319   I: 13864655-13864973 Caenorhabditis elegans
Exon34846   629   I: 13866279-13866907 Caenorhabditis elegans
Exon34848   404   I: 13868803-13869206 Caenorhabditis elegans
Exon34850   506   I: 13870501-13871006 Caenorhabditis elegans
Exon34852   309   I: 13872890-13873198 Caenorhabditis elegans
Exon34854   578   I: 13875709-13876286 Caenorhabditis elegans
Exon34856   144   I: 13879063-13879206 Caenorhabditis elegans
Exon34858   192   I: 13879776-13879967 Caenorhabditis elegans
Exon34860   294   I: 13881752-13882045 Caenorhabditis elegans
Exon34862   393   I: 13883342-13883734 Caenorhabditis elegans
Exon34864   592   I: 13885471-13886062 Caenorhabditis elegans
Exon34865   477   I: 13887067-13887543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04A8.7b.1 13861476 13887543 1

1 Sequence

Length
5563

1 Sequence Ontology Term

Identifier Name Description
transcript