WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71A12B.6.1 Sequence Name  Y71A12B.6.1
Length (nt)  951   Chromosome Location  I: 13919375-13922122
Chromosome . Primary Identifier  I Chromosome Location . Start  13919375
Chromosome Location . End  13922122 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71A12B.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013503 clec-112 Y71A12B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71A12B.6 Y71A12B.6 951   I: 13919375-13919419

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71A12B.6.1 13919375 13922122 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34934   45   I: 13919375-13919419 Caenorhabditis elegans
Exon34935   126   I: 13919462-13919587 Caenorhabditis elegans
Exon34936   108   I: 13919749-13919856 Caenorhabditis elegans
Exon34937   57   I: 13919904-13919960 Caenorhabditis elegans
Exon34938   141   I: 13921322-13921462 Caenorhabditis elegans
Exon34939   118   I: 13921508-13921625 Caenorhabditis elegans
Exon34940   134   I: 13921673-13921806 Caenorhabditis elegans
Exon34941   155   I: 13921855-13922009 Caenorhabditis elegans
Exon34942   67   I: 13922056-13922122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71A12B.6.1 13919375 13922122 1

1 Sequence

Length
951

1 Sequence Ontology Term

Identifier Name Description
transcript