WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71A12B.8.1 Sequence Name  Y71A12B.8.1
Length (nt)  1221   Chromosome Location  I: 13938810-13942016
Chromosome . Primary Identifier  I Chromosome Location . Start  13938810
Chromosome Location . End  13942016 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71A12B.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013505 Y71A12B.8 Y71A12B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71A12B.8 Y71A12B.8 1068   I: 13938810-13938851

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71A12B.8.1 13938810 13942016 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon34948   42   I: 13938810-13938851 Caenorhabditis elegans
Exon34949   84   I: 13938907-13938990 Caenorhabditis elegans
Exon34950   414   I: 13939493-13939906 Caenorhabditis elegans
Exon34951   91   I: 13939958-13940048 Caenorhabditis elegans
Exon34952   71   I: 13941017-13941087 Caenorhabditis elegans
Exon34953   90   I: 13941324-13941413 Caenorhabditis elegans
Exon34954   108   I: 13941459-13941566 Caenorhabditis elegans
Exon34955   50   I: 13941648-13941697 Caenorhabditis elegans
Exon34956   271   I: 13941746-13942016 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71A12B.8.1 13938810 13942016 1

1 Sequence

Length
1221

1 Sequence Ontology Term

Identifier Name Description
transcript