WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71A12B.11.1 Sequence Name  Y71A12B.11.1
Length (nt)  961   Chromosome Location  I: 13978430-13980130
Chromosome . Primary Identifier  I Chromosome Location . Start  13978430
Chromosome Location . End  13980130 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71A12B.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013508 Y71A12B.11 Y71A12B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71A12B.11 Y71A12B.11 861   I: 13978447-13978496

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71A12B.11.1 13978430 13980130 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35018   67   I: 13978430-13978496 Caenorhabditis elegans
Exon35019   84   I: 13979181-13979264 Caenorhabditis elegans
Exon35020   810   I: 13979321-13980130 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71A12B.11.1 13978430 13980130 1

1 Sequence

Length
961

1 Sequence Ontology Term

Identifier Name Description
transcript