WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47G4.4.1 Sequence Name  F47G4.4.1
Length (nt)  2347   Chromosome Location  I: 14062749-14068803
Chromosome . Primary Identifier  I Chromosome Location . Start  14062749
Chromosome Location . End  14068803 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009825 F47G4.4 F47G4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47G4.4 F47G4.4 2169   I: 14062889-14062993

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47G4.4.1 14062749 14068803 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35175   245   I: 14062749-14062993 Caenorhabditis elegans
Exon35176   173   I: 14063045-14063217 Caenorhabditis elegans
Exon35177   165   I: 14063266-14063430 Caenorhabditis elegans
Exon35178   332   I: 14063478-14063809 Caenorhabditis elegans
Exon35179   299   I: 14063867-14064165 Caenorhabditis elegans
Exon35180   138   I: 14064481-14064618 Caenorhabditis elegans
Exon35181   180   I: 14064666-14064845 Caenorhabditis elegans
Exon35182   101   I: 14065259-14065359 Caenorhabditis elegans
Exon35183   148   I: 14065412-14065559 Caenorhabditis elegans
Exon35184   141   I: 14065614-14065754 Caenorhabditis elegans
Exon35185   258   I: 14066289-14066546 Caenorhabditis elegans
Exon35186   116   I: 14067560-14067675 Caenorhabditis elegans
Exon35187   51   I: 14068753-14068803 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47G4.4.1 14062749 14068803 -1

1 Sequence

Length
2347

1 Sequence Ontology Term

Identifier Name Description
transcript