WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47G4.3.1 Sequence Name  F47G4.3.1
Length (nt)  1308   Chromosome Location  I: 14075837-14078211
Chromosome . Primary Identifier  I Chromosome Location . Start  14075837
Chromosome Location . End  14078211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009824 gpdh-1 F47G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47G4.3 F47G4.3 1125   I: 14075877-14076065

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47G4.3.1 14075837 14078211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35192   229   I: 14075837-14076065 Caenorhabditis elegans
Exon35193   501   I: 14076124-14076624 Caenorhabditis elegans
Exon35194   231   I: 14077551-14077781 Caenorhabditis elegans
Exon35195   347   I: 14077865-14078211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47G4.3.1 14075837 14078211 1

1 Sequence

Length
1308

1 Sequence Ontology Term

Identifier Name Description
transcript