WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y63D3A.6b.1 Sequence Name  Y63D3A.6b.1
Length (nt)  2555   Chromosome Location  I: 14104515-14113108
Chromosome . Primary Identifier  I Chromosome Location . Start  14104515
Chromosome Location . End  14113108 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y63D3A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001047 dnj-29 Y63D3A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y63D3A.6b Y63D3A.6b 2259   I: 14104794-14104919

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y63D3A.6b.1 14104515 14113108 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35241   405   I: 14104515-14104919 Caenorhabditis elegans
Exon35242   105   I: 14105060-14105164 Caenorhabditis elegans
Exon35243   336   I: 14106336-14106671 Caenorhabditis elegans
Exon35245   492   I: 14107862-14108353 Caenorhabditis elegans
Exon35248   214   I: 14109232-14109445 Caenorhabditis elegans
Exon35250   244   I: 14110065-14110308 Caenorhabditis elegans
Exon35252   109   I: 14110803-14110911 Caenorhabditis elegans
Exon35254   237   I: 14110972-14111208 Caenorhabditis elegans
Exon35256   156   I: 14112576-14112731 Caenorhabditis elegans
Exon35258   116   I: 14112792-14112907 Caenorhabditis elegans
Exon35260   141   I: 14112968-14113108 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y63D3A.6b.1 14104515 14113108 -1

1 Sequence

Length
2555

1 Sequence Ontology Term

Identifier Name Description
transcript