WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37A5.9.1 Sequence Name  C37A5.9.1
Length (nt)  1973   Chromosome Location  I: 14172828-14179360
Chromosome . Primary Identifier  I Chromosome Location . Start  14172828
Chromosome Location . End  14179360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37A5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004202 pry-1 C37A5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37A5.9 C37A5.9 1761   I: 14173036-14173062

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37A5.9.1 14172828 14179360 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35351   235   I: 14172828-14173062 Caenorhabditis elegans
Exon35352   91   I: 14173124-14173214 Caenorhabditis elegans
Exon35353   100   I: 14173474-14173573 Caenorhabditis elegans
Exon35354   423   I: 14173737-14174159 Caenorhabditis elegans
Exon35355   181   I: 14175080-14175260 Caenorhabditis elegans
Exon35356   229   I: 14175984-14176212 Caenorhabditis elegans
Exon35357   132   I: 14176835-14176966 Caenorhabditis elegans
Exon35358   182   I: 14177014-14177195 Caenorhabditis elegans
Exon35360   138   I: 14177961-14178098 Caenorhabditis elegans
Exon35361   90   I: 14178144-14178233 Caenorhabditis elegans
Exon35362   63   I: 14178293-14178355 Caenorhabditis elegans
Exon35363   109   I: 14179252-14179360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37A5.9.1 14172828 14179360 -1

1 Sequence

Length
1973

1 Sequence Ontology Term

Identifier Name Description
transcript