WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK849.2a Sequence Name  ZK849.2a
Length (nt)  1245   Chromosome Location  I: 14185861-14185936
Chromosome . Primary Identifier  I Chromosome Location . Start  14185861
Chromosome Location . End  14185936
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK849.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40678 GOPC-1, isoform a 46.3 414 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00059766
WBRNAi00004946
WBRNAi00038468
WBRNAi00064443

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK849.2a 14185861 14185936 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014101 gopc-1 ZK849.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK849.2a 14185861 14185936 -1
CDS:ZK849.2a 14186536 14186636 -1
CDS:ZK849.2a 14186685 14186849 -1
CDS:ZK849.2a 14187262 14187400 -1
CDS:ZK849.2a 14187459 14187592 -1
CDS:ZK849.2a 14187653 14187973 -1
CDS:ZK849.2a 14188020 14188130 -1
CDS:ZK849.2a 14188195 14188293 -1
CDS:ZK849.2a 14188797 14188895 -1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK849.2a.1 ZK849.2a.1 1550   I: 14185628-14188967