WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49A1.3 Sequence Name  C49A1.3
Length (nt)  1335   Chromosome Location  I: 14216756-14216942
Chromosome . Primary Identifier  I Chromosome Location . Start  14216756
Chromosome Location . End  14216942
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49A1.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08829 BEST-11 51.0 444 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042755
WBRNAi00003202
WBRNAi00029953

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49A1.3 14216756 14216942 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008186 best-11 C49A1.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49A1.3 14216756 14216942 -1
CDS:C49A1.3 14216991 14217157 -1
CDS:C49A1.3 14217207 14217356 -1
CDS:C49A1.3 14218377 14218577 -1
CDS:C49A1.3 14218622 14218931 -1
CDS:C49A1.3 14219756 14219893 -1
CDS:C49A1.3 14219940 14220064 -1
CDS:C49A1.3 14220122 14220178 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49A1.3.1 C49A1.3.1 1462   I: 14216701-14220624