WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49B2.6.1 Sequence Name  F49B2.6.1
Length (nt)  3372   Chromosome Location  I: 14331085-14339839
Chromosome . Primary Identifier  I Chromosome Location . Start  14331085
Chromosome Location . End  14339839 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009865 F49B2.6 F49B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49B2.6 F49B2.6 3249   I: 14331085-14331139

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49B2.6.1 14331085 14339839 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35598   55   I: 14331085-14331139 Caenorhabditis elegans
Exon35599   512   I: 14331677-14332188 Caenorhabditis elegans
Exon35600   225   I: 14332834-14333058 Caenorhabditis elegans
Exon35601   96   I: 14333106-14333201 Caenorhabditis elegans
Exon35602   62   I: 14333252-14333313 Caenorhabditis elegans
Exon35603   102   I: 14333364-14333465 Caenorhabditis elegans
Exon35604   308   I: 14334314-14334621 Caenorhabditis elegans
Exon35605   269   I: 14335340-14335608 Caenorhabditis elegans
Exon35606   261   I: 14335669-14335929 Caenorhabditis elegans
Exon35607   200   I: 14335979-14336178 Caenorhabditis elegans
Exon35608   56   I: 14336222-14336277 Caenorhabditis elegans
Exon35609   125   I: 14337060-14337184 Caenorhabditis elegans
Exon35610   109   I: 14337234-14337342 Caenorhabditis elegans
Exon35611   182   I: 14337391-14337572 Caenorhabditis elegans
Exon35612   260   I: 14338807-14339066 Caenorhabditis elegans
Exon35613   138   I: 14339117-14339254 Caenorhabditis elegans
Exon35614   106   I: 14339301-14339406 Caenorhabditis elegans
Exon35615   306   I: 14339534-14339839 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49B2.6.1 14331085 14339839 1

1 Sequence

Length
3372

1 Sequence Ontology Term

Identifier Name Description
transcript