WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49B2.6.1 Sequence Name  F49B2.6.1
Length (nt)  3372   Chromosome Location  I: 14331085-14339839
Chromosome . Primary Identifier  I Chromosome Location . Start  14331085
Chromosome Location . End  14339839 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009865 F49B2.6 F49B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49B2.6 F49B2.6 3249   I: 14331085-14331139

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49B2.6.1 14331085 14339839 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35624   55   I: 14331085-14331139 Caenorhabditis elegans
Exon35625   512   I: 14331677-14332188 Caenorhabditis elegans
Exon35626   225   I: 14332834-14333058 Caenorhabditis elegans
Exon35627   96   I: 14333106-14333201 Caenorhabditis elegans
Exon35628   62   I: 14333252-14333313 Caenorhabditis elegans
Exon35629   102   I: 14333364-14333465 Caenorhabditis elegans
Exon35630   308   I: 14334314-14334621 Caenorhabditis elegans
Exon35631   269   I: 14335340-14335608 Caenorhabditis elegans
Exon35632   261   I: 14335669-14335929 Caenorhabditis elegans
Exon35633   200   I: 14335979-14336178 Caenorhabditis elegans
Exon35634   56   I: 14336222-14336277 Caenorhabditis elegans
Exon35635   125   I: 14337060-14337184 Caenorhabditis elegans
Exon35636   109   I: 14337234-14337342 Caenorhabditis elegans
Exon35637   182   I: 14337391-14337572 Caenorhabditis elegans
Exon35638   260   I: 14338807-14339066 Caenorhabditis elegans
Exon35639   138   I: 14339117-14339254 Caenorhabditis elegans
Exon35640   106   I: 14339301-14339406 Caenorhabditis elegans
Exon35641   306   I: 14339534-14339839 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49B2.6.1 14331085 14339839 1

1 Sequence

Length
3372

1 Sequence Ontology Term

Identifier Name Description
transcript