WormMine: Gene WBGene00255584

• WormBase Gene ID: WBGene00255584
• Gene Name: mir-8187
• Sequence Name: Y105E8A.51
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in AFD based on RNA-seq studies. Is affected by glp-1 based on RNA-seq studies.
• Biotype: SO:0001265
• Genetic Position: :±
• Length (nt): 77

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00255584

Genomics

2 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y105E8A.51b	Y105E8A.51b	21	I: 14368397-14368417
Transcript:Y105E8A.51a	Y105E8A.51a	20	I: 14368454-14368473

Other

0 CDSs

3 RNAi Result

• WBRNAi00055231
• WBRNAi00036496
• WBRNAi00102618

6 Allele

• gk963849
• gk964175
• gk962681
• gk963947
• gk769472
• gk958694

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00255584
• Start: 14368397
• End: 14368473
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression glp-1(e2141); TU3401 animals comparing to in TU3401 animals.	Fold change > 2, FDR < 0.01.	WBPaper00065993:glp-1(e2141)_upregulated
Temperature Shift: 25C vs 15C for 16 hours at L4 larva stage.	Transcripts that showed significantly increased expression in AFD neurons comparing to in whole animals.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00065158:AFD_enriched
Acidic Environment: PH 4.33 vs. PH 6.33.	Transcripts that showed significantly decreased expression after 3 hours of exposure to acidic environment (PH 4.33), comparing to control animals exposed to PH 6.33 environment.	DESeq2 (1.16.1). The Benjamini and Hochberg's approach was used to adjust the resulting P-values to control the false discovery rate. Corrected value of P < 0.05 and fold change > 2 were set as the threshold for significantly differential expression.	WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
Heat Shock: 5 min at 34C.	Transcripts that showed significantly decreased expression after 5 minutes heat shock at 34C.	DESeq2,, FDR < 0.01	WBPaper00059598:HeatShock_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00255584
• Start: 14368397
• End: 14368473
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 77

1 Sequence Ontology Term