WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8A.5 Sequence Name  Y105E8A.5
Length (nt)  1731   Chromosome Location  I: 14371323-14371575
Chromosome . Primary Identifier  I Chromosome Location . Start  14371323
Chromosome Location . End  14371575
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25181 BBS-1 64.5 576 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055232
WBRNAi00036497

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.5 14371323 14371575 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000241 bbs-1 Y105E8A.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.5 14371323 14371575 -1
CDS:Y105E8A.5 14372324 14372499 -1
CDS:Y105E8A.5 14372550 14372909 -1
CDS:Y105E8A.5 14373412 14373495 -1
CDS:Y105E8A.5 14373650 14373789 -1
CDS:Y105E8A.5 14373970 14374135 -1
CDS:Y105E8A.5 14374186 14374407 -1
CDS:Y105E8A.5 14374545 14374619 -1
CDS:Y105E8A.5 14375764 14376018 -1

1 Sequence

Length
1731

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8A.5.1 Y105E8A.5.1 1984   I: 14371138-14376086