WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.7d.1 Sequence Name  Y105E8A.7d.1
Length (nt)  2920   Chromosome Location  I: 14391860-14400222
Chromosome . Primary Identifier  I Chromosome Location . Start  14391860
Chromosome Location . End  14400222 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001147 eat-18 Y105E8A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.7d Y105E8A.7d 237   I: 14392007-14392203

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.7d.1 14391860 14400222 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35668   344   I: 14391860-14392203 Caenorhabditis elegans
Exon35678   83   I: 14393547-14393629 Caenorhabditis elegans
Exon35684   212   I: 14393758-14393969 Caenorhabditis elegans
Exon35689   208   I: 14395102-14395309 Caenorhabditis elegans
Exon35695   162   I: 14395360-14395521 Caenorhabditis elegans
Exon35701   151   I: 14396346-14396496 Caenorhabditis elegans
Exon35707   125   I: 14396540-14396664 Caenorhabditis elegans
Exon35713   382   I: 14396717-14397098 Caenorhabditis elegans
Exon35718   331   I: 14397612-14397942 Caenorhabditis elegans
Exon35723   540   I: 14398318-14398857 Caenorhabditis elegans
Exon35731   217   I: 14399623-14399839 Caenorhabditis elegans
Exon35736   165   I: 14400058-14400222 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.7d.1 14391860 14400222 1

1 Sequence

Length
2920

1 Sequence Ontology Term

Identifier Name Description
transcript