WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.7d.2 Sequence Name  Y105E8A.7d.2
Length (nt)  3145   Chromosome Location  I: 14391872-14400212
Chromosome . Primary Identifier  I Chromosome Location . Start  14391872
Chromosome Location . End  14400212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.7d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001147 eat-18 Y105E8A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.7d Y105E8A.7d 237   I: 14392007-14392203

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.7d.2 14391872 14400212 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35695   332   I: 14391872-14392203 Caenorhabditis elegans
Exon35707   423   I: 14393547-14393969 Caenorhabditis elegans
Exon35716   208   I: 14395102-14395309 Caenorhabditis elegans
Exon35722   162   I: 14395360-14395521 Caenorhabditis elegans
Exon35728   151   I: 14396346-14396496 Caenorhabditis elegans
Exon35734   125   I: 14396540-14396664 Caenorhabditis elegans
Exon35740   382   I: 14396717-14397098 Caenorhabditis elegans
Exon35745   331   I: 14397612-14397942 Caenorhabditis elegans
Exon35750   540   I: 14398318-14398857 Caenorhabditis elegans
Exon35753   119   I: 14399418-14399536 Caenorhabditis elegans
Exon35758   217   I: 14399623-14399839 Caenorhabditis elegans
Exon35760   155   I: 14400058-14400212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.7d.2 14391872 14400212 1

1 Sequence

Length
3145

1 Sequence Ontology Term

Identifier Name Description
transcript