WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8A.8 Sequence Name  Y105E8A.8
Length (nt)  1350   Chromosome Location  I: 14400893-14401261
Chromosome . Primary Identifier  I Chromosome Location . Start  14400893
Chromosome Location . End  14401261
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29846 TCAB-1 50.3 449 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00055234
WBRNAi00004481
WBRNAi00004482
WBRNAi00004483
WBRNAi00036500
WBRNAi00117013
WBRNAi00062410
WBRNAi00062411

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.8 14400893 14401261 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013669 tcab-1 Y105E8A.8 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.8 14400893 14401261 -1
CDS:Y105E8A.8 14402410 14402618 -1
CDS:Y105E8A.8 14403942 14404077 -1
CDS:Y105E8A.8 14404872 14405033 -1
CDS:Y105E8A.8 14405082 14405238 -1
CDS:Y105E8A.8 14405285 14405505 -1
CDS:Y105E8A.8 14405554 14405649 -1

1 Sequence

Length
1350

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8A.8.1 Y105E8A.8.1 1560   I: 14400683-14405649