WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.17a.1 Sequence Name  Y105E8A.17a.1
Length (nt)  1591   Chromosome Location  I: 14469506-14476615
Chromosome . Primary Identifier  I Chromosome Location . Start  14469506
Chromosome Location . End  14476615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.17a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013676 ekl-4 Y105E8A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.17a Y105E8A.17a 1461   I: 14469506-14469703

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.17a.1 14469506 14476615 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35882   198   I: 14469506-14469703 Caenorhabditis elegans
Exon35883   141   I: 14469758-14469898 Caenorhabditis elegans
Exon35885   549   I: 14470398-14470946 Caenorhabditis elegans
Exon35887   145   I: 14473258-14473402 Caenorhabditis elegans
Exon35889   293   I: 14474639-14474931 Caenorhabditis elegans
Exon35892   265   I: 14476351-14476615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.17a.1 14469506 14476615 1

1 Sequence

Length
1591

1 Sequence Ontology Term

Identifier Name Description
transcript