WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.21a.1 Sequence Name  Y105E8A.21a.1
Length (nt)  2904   Chromosome Location  I: 14499735-14510552
Chromosome . Primary Identifier  I Chromosome Location . Start  14499735
Chromosome Location . End  14510552 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.21a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013679 Y105E8A.21 Y105E8A.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.21a Y105E8A.21a 2805   I: 14499821-14500346

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.21a.1 14499735 14510552 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35894   612   I: 14499735-14500346 Caenorhabditis elegans
Exon35897   154   I: 14500808-14500961 Caenorhabditis elegans
Exon35898   426   I: 14501731-14502156 Caenorhabditis elegans
Exon35899   833   I: 14503928-14504760 Caenorhabditis elegans
Exon35900   299   I: 14506335-14506633 Caenorhabditis elegans
Exon35901   384   I: 14508375-14508758 Caenorhabditis elegans
Exon35902   196   I: 14510357-14510552 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.21a.1 14499735 14510552 -1

1 Sequence

Length
2904

1 Sequence Ontology Term

Identifier Name Description
transcript