WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.26a.1 Sequence Name  Y105E8A.26a.1
Length (nt)  3731   Chromosome Location  I: 14529529-14546870
Chromosome . Primary Identifier  I Chromosome Location . Start  14529529
Chromosome Location . End  14546870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.26a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013683 zoo-1 Y105E8A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.26a Y105E8A.26a 3492   I: 14529532-14529627

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.26a.1 14529529 14546870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35907   99   I: 14529529-14529627 Caenorhabditis elegans
Exon35910   54   I: 14531977-14532030 Caenorhabditis elegans
Exon35915   125   I: 14535952-14536076 Caenorhabditis elegans
Exon35918   100   I: 14536902-14537001 Caenorhabditis elegans
Exon35922   410   I: 14537059-14537468 Caenorhabditis elegans
Exon35926   205   I: 14537735-14537939 Caenorhabditis elegans
Exon35930   956   I: 14539193-14540148 Caenorhabditis elegans
Exon35934   544   I: 14541264-14541807 Caenorhabditis elegans
Exon35938   117   I: 14542264-14542380 Caenorhabditis elegans
Exon35941   67   I: 14543340-14543406 Caenorhabditis elegans
Exon35945   337   I: 14543456-14543792 Caenorhabditis elegans
Exon35949   287   I: 14544621-14544907 Caenorhabditis elegans
Exon35956   430   I: 14546441-14546870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.26a.1 14529529 14546870 1

1 Sequence

Length
3731

1 Sequence Ontology Term

Identifier Name Description
transcript