WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.26c.1 Sequence Name  Y105E8A.26c.1
Length (nt)  3616   Chromosome Location  I: 14531977-14546854
Chromosome . Primary Identifier  I Chromosome Location . Start  14531977
Chromosome Location . End  14546854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.26c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013683 zoo-1 Y105E8A.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.26c Y105E8A.26c 3396   I: 14531977-14532030

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.26c.1 14531977 14546854 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35912   54   I: 14531977-14532030 Caenorhabditis elegans
Exon35917   125   I: 14535952-14536076 Caenorhabditis elegans
Exon35920   100   I: 14536902-14537001 Caenorhabditis elegans
Exon35924   410   I: 14537059-14537468 Caenorhabditis elegans
Exon35928   205   I: 14537735-14537939 Caenorhabditis elegans
Exon35932   956   I: 14539193-14540148 Caenorhabditis elegans
Exon35936   544   I: 14541264-14541807 Caenorhabditis elegans
Exon35939   117   I: 14542264-14542380 Caenorhabditis elegans
Exon35943   67   I: 14543340-14543406 Caenorhabditis elegans
Exon35947   337   I: 14543456-14543792 Caenorhabditis elegans
Exon35951   287   I: 14544621-14544907 Caenorhabditis elegans
Exon35954   414   I: 14546441-14546854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.26c.1 14531977 14546854 1

1 Sequence

Length
3616

1 Sequence Ontology Term

Identifier Name Description
transcript