WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8B.1l.1 Sequence Name  Y105E8B.1l.1
Length (nt)  1128   Chromosome Location  I: 14621169-14625446
Chromosome . Primary Identifier  I Chromosome Location . Start  14621169
Chromosome Location . End  14625446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.1l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1l Y105E8B.1l 771   I: 14621514-14621596

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1l.1 14621169 14625446 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36113   428   I: 14621169-14621596 Caenorhabditis elegans
Exon36149   70   I: 14622828-14622897 Caenorhabditis elegans
Exon36166   139   I: 14623010-14623148 Caenorhabditis elegans
Exon36189   71   I: 14623828-14623898 Caenorhabditis elegans
Exon36209   118   I: 14624303-14624420 Caenorhabditis elegans
Exon36234   134   I: 14624956-14625089 Caenorhabditis elegans
Exon36241   168   I: 14625279-14625446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1l.1 14621169 14625446 -1

1 Sequence

Length
1128

1 Sequence Ontology Term

Identifier Name Description
transcript