WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8B.1a.1 Sequence Name  Y105E8B.1a.1
Length (nt)  1243   Chromosome Location  I: 14621179-14631012
Chromosome . Primary Identifier  I Chromosome Location . Start  14621179
Chromosome Location . End  14631012 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1a Y105E8B.1a 855   I: 14621514-14621596

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1a.1 14621179 14631012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36122   418   I: 14621179-14621596 Caenorhabditis elegans
Exon36138   70   I: 14622828-14622897 Caenorhabditis elegans
Exon36158   139   I: 14623010-14623148 Caenorhabditis elegans
Exon36178   71   I: 14623828-14623898 Caenorhabditis elegans
Exon36201   118   I: 14624030-14624147 Caenorhabditis elegans
Exon36221   134   I: 14624786-14624919 Caenorhabditis elegans
Exon36244   57   I: 14629885-14629941 Caenorhabditis elegans
Exon36253   138   I: 14630642-14630779 Caenorhabditis elegans
Exon36267   98   I: 14630915-14631012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1a.1 14621179 14631012 -1

1 Sequence

Length
1243

1 Sequence Ontology Term

Identifier Name Description
transcript