WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8B.1d.1 Sequence Name  Y105E8B.1d.1
Length (nt)  1536   Chromosome Location  I: 14621176-14631094
Chromosome . Primary Identifier  I Chromosome Location . Start  14621176
Chromosome Location . End  14631094 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1d Y105E8B.1d 855   I: 14622429-14622511

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1d.1 14621176 14631094 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36158   421   I: 14621176-14621596 Caenorhabditis elegans
Exon36168   208   I: 14622304-14622511 Caenorhabditis elegans
Exon36178   70   I: 14622828-14622897 Caenorhabditis elegans
Exon36198   139   I: 14623010-14623148 Caenorhabditis elegans
Exon36218   71   I: 14623828-14623898 Caenorhabditis elegans
Exon36240   118   I: 14624030-14624147 Caenorhabditis elegans
Exon36259   134   I: 14624786-14624919 Caenorhabditis elegans
Exon36282   57   I: 14629885-14629941 Caenorhabditis elegans
Exon36291   138   I: 14630642-14630779 Caenorhabditis elegans
Exon36307   180   I: 14630915-14631094 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1d.1 14621176 14631094 -1

1 Sequence

Length
1536

1 Sequence Ontology Term

Identifier Name Description
transcript