WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8B.1g.1 Sequence Name  Y105E8B.1g.1
Length (nt)  883   Chromosome Location  I: 14622429-14630987
Chromosome . Primary Identifier  I Chromosome Location . Start  14622429
Chromosome Location . End  14630987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1g Y105E8B.1g 855   I: 14622429-14622511

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1g.1 14622429 14630987 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36135   83   I: 14622429-14622511 Caenorhabditis elegans
Exon36145   70   I: 14622828-14622897 Caenorhabditis elegans
Exon36173   139   I: 14623571-14623709 Caenorhabditis elegans
Exon36185   71   I: 14623828-14623898 Caenorhabditis elegans
Exon36204   118   I: 14624030-14624147 Caenorhabditis elegans
Exon36223   134   I: 14624786-14624919 Caenorhabditis elegans
Exon36247   57   I: 14629885-14629941 Caenorhabditis elegans
Exon36256   138   I: 14630642-14630779 Caenorhabditis elegans
Exon36266   73   I: 14630915-14630987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.1g.1 14622429 14630987 -1

1 Sequence

Length
883

1 Sequence Ontology Term

Identifier Name Description
transcript