WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8B.2b.1 Sequence Name  Y105E8B.2b.1
Length (nt)  1164   Chromosome Location  I: 14634628-14642561
Chromosome . Primary Identifier  I Chromosome Location . Start  14634628
Chromosome Location . End  14642561 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013687 exoc-8 Y105E8B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.2b Y105E8B.2b 1020   I: 14635197-14635318

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.2b.1 14634628 14642561 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36272   139   I: 14634628-14634766 Caenorhabditis elegans
Exon36274   127   I: 14635192-14635318 Caenorhabditis elegans
Exon36279   338   I: 14638603-14638940 Caenorhabditis elegans
Exon36281   340   I: 14641149-14641488 Caenorhabditis elegans
Exon36283   165   I: 14641549-14641713 Caenorhabditis elegans
Exon36284   55   I: 14642507-14642561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.2b.1 14634628 14642561 -1

1 Sequence

Length
1164

1 Sequence Ontology Term

Identifier Name Description
transcript