WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8B.4.1 Sequence Name  Y105E8B.4.1
Length (nt)  1487   Chromosome Location  I: 14647782-14651288
Chromosome . Primary Identifier  I Chromosome Location . Start  14647782
Chromosome Location . End  14651288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013689 bath-40 Y105E8B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.4 Y105E8B.4 1209   I: 14647793-14648007

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.4.1 14647782 14651288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36327   226   I: 14647782-14648007 Caenorhabditis elegans
Exon36328   419   I: 14648077-14648495 Caenorhabditis elegans
Exon36329   428   I: 14650033-14650460 Caenorhabditis elegans
Exon36330   414   I: 14650875-14651288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8B.4.1 14647782 14651288 1

1 Sequence

Length
1487

1 Sequence Ontology Term

Identifier Name Description
transcript