WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8B.5 Sequence Name  Y105E8B.5
Length (nt)  645   Chromosome Location  I: 14657396-14657434
Chromosome . Primary Identifier  I Chromosome Location . Start  14657396
Chromosome Location . End  14657434
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24099 HPRT-1 23.8 214 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00055240
WBRNAi00004471
WBRNAi00036489
WBRNAi00071085
WBRNAi00117020
WBRNAi00064442
WBRNAi00023341
WBRNAi00023854
WBRNAi00024141
WBRNAi00024209

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8B.5 14657396 14657434 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013690 hprt-1 Y105E8B.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8B.5 14657396 14657434 1
CDS:Y105E8B.5 14658899 14659004 1
CDS:Y105E8B.5 14660749 14661248 1

1 Sequence

Length
645

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8B.5.1 Y105E8B.5.1 933   I: 14657355-14661495