WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E5A.2.1 Sequence Name  Y54E5A.2.1
Length (nt)  1887   Chromosome Location  I: 14694154-14700392
Chromosome . Primary Identifier  I Chromosome Location . Start  14694154
Chromosome Location . End  14700392 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013198 Y54E5A.2 Y54E5A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E5A.2 Y54E5A.2 1779   I: 14694170-14694239

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5A.2.1 14694154 14700392 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon36355   86   I: 14694154-14694239 Caenorhabditis elegans
Exon36356   275   I: 14694315-14694589 Caenorhabditis elegans
Exon36357   232   I: 14695321-14695552 Caenorhabditis elegans
Exon36358   95   I: 14696444-14696538 Caenorhabditis elegans
Exon36359   118   I: 14696585-14696702 Caenorhabditis elegans
Exon36360   172   I: 14697176-14697347 Caenorhabditis elegans
Exon36361   28   I: 14697441-14697468 Caenorhabditis elegans
Exon36362   179   I: 14697945-14698123 Caenorhabditis elegans
Exon36363   103   I: 14698756-14698858 Caenorhabditis elegans
Exon36364   98   I: 14698906-14699003 Caenorhabditis elegans
Exon36365   252   I: 14699250-14699501 Caenorhabditis elegans
Exon36366   62   I: 14699986-14700047 Caenorhabditis elegans
Exon36367   187   I: 14700206-14700392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E5A.2.1 14694154 14700392 1

1 Sequence

Length
1887

1 Sequence Ontology Term

Identifier Name Description
transcript