WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

CDS :

WormMine ID  CDS:Y54E5A.7b Sequence Name  Y54E5A.7b
Length (nt)  1188   Chromosome Location  I: 14712641-14712821
Chromosome . Primary Identifier  I Chromosome Location . Start  14712641
Chromosome Location . End  14712821
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E5A.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45898 GID-1, isoform b 45.5 395 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057386
WBRNAi00004744
WBRNAi00037478
WBRNAi00065296

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.7b 14712641 14712821 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013202 gid-1 Y54E5A.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E5A.7b 14712641 14712821 1
CDS:Y54E5A.7b 14712906 14713088 1
CDS:Y54E5A.7b 14713340 14713493 1
CDS:Y54E5A.7b 14713549 14713789 1
CDS:Y54E5A.7b 14714138 14714303 1
CDS:Y54E5A.7b 14714427 14714557 1
CDS:Y54E5A.7b 14714621 14714752 1

1 Sequence

Length
1188

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E5A.7b.1 Y54E5A.7b.1 1188   I: 14712641-14714752